Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 105 - 2992 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 162 - 275 | 18.01 |
| hippurate hydrolase | SAMN06295900_1012 | Not Available | Negative | 369 - 1562 | 43083.2 |
| anaerobic selenocysteine-containing dehydrogenase | SAMN06295900_1013 | Not Available | Positive | 1778 - 3793 | 73286.3 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 3744 - 5278 | 18.01 |
| long-chain acyl-coa synthetase | SAMN06295900_1014 | Not Available | Positive | 3918 - 5642 | 62528.9 |
| ubiquinone biosynthesis monooxygenase coq7 | SAMN06295900_1015 | Not Available | Positive | 5829 - 6464 | 22916.3 |
| mraz protein | SAMN06295900_1016 | Not Available | Positive | 6834 - 7262 | 15795.2 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN06295900_1017 | Not Available | Positive | 7289 - 8230 | 33918.8 |
| cell division protein ftsl | SAMN06295900_1018 | Not Available | Positive | 8227 - 8604 | 13460.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.