Rhodococcus sp. AG1013

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. AG1013 is a notable bacterial strain characterized by the presence of flagella, which suggests motility capabilities. This trait may facilitate its movement through various environments, potentially enhancing its interactions with other microorganisms and its ecological niche. The strain possesses a single replicon, indicating a streamlined genomic structure. This could reflect a certain level of evolutionary adaptation, allowing for efficient replication and maintenance of essential genetic functions. The genetic material of Rhodococcus sp. AG1013 is cataloged under the accession number QQAT00000000.1, providing a reference point for further genomic studies and comparisons with other related species. Understanding the traits of Rhodococcus sp. AG1013 is crucial for recognizing its potential applications in bioremediation or industrial biotechnology, as members of the Rhodococcus genus are known for their capability to degrade a variety of organic compounds. The motility conferred by its flagella may play a significant role in its ability to colonize and metabolize substrates in diverse environments, thus contributing to nutrient cycling and ecological balance. Overall, Rhodococcus sp. AG1013 exemplifies the intricate relationships between microbial motility, genomic organization, and ecological interactions, highlighting its potential significance in both natural ecosystems and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. AG1013
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. AG1013 Ga0222397_155, whole genome shotgun

Gene Summary

Adenine Count

921410 bp

Thymine Count

940301 bp

Guanine Count

2023219 bp

Cytosine Count

1978588 bp

Genome Length

5864498 bp

Protein-coding Genes

5519 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid/amide abc transporter atp-binding protein 2 (haat family)DEU38_122115Not AvailablePositive4840681 - 484141526335.2
hypothetical proteinDEU38_122116Not AvailableNegative4841858 - 48419784442.17
iron/manganese superoxide dismutase-like proteinDEU38_1231Not AvailableNegative4841979 - 48421004785.75
putative flippase gtraDEU38_1232Not AvailablePositive4842140 - 484265218618.9
putative f420-dependent oxidoreductaseDEU38_1233Not AvailablePositive4842741 - 484358930882.4
s1-c subfamily serine proteaseDEU38_1234Not AvailableNegative4843596 - 484471137545.8
dtdp-4-dehydrorhamnose 3,5-epimeraseDEU38_1235Not AvailableNegative4844716 - 484532121889.8
glucose-1-phosphate thymidylyltransferaseDEU38_1236Not AvailableNegative4845323 - 484619831906.9
transcriptional activatorDEU38_1237Not AvailablePositive4846531 - 4849446104872.0
hypothetical proteinDEU38_12315Not AvailableNegative4855656 - 485815185154.0

Displaying genes 4731 – 4740 of 5687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.