Rhodococcus sp. AG1013

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. AG1013 is a notable bacterial strain characterized by the presence of flagella, which suggests motility capabilities. This trait may facilitate its movement through various environments, potentially enhancing its interactions with other microorganisms and its ecological niche. The strain possesses a single replicon, indicating a streamlined genomic structure. This could reflect a certain level of evolutionary adaptation, allowing for efficient replication and maintenance of essential genetic functions. The genetic material of Rhodococcus sp. AG1013 is cataloged under the accession number QQAT00000000.1, providing a reference point for further genomic studies and comparisons with other related species. Understanding the traits of Rhodococcus sp. AG1013 is crucial for recognizing its potential applications in bioremediation or industrial biotechnology, as members of the Rhodococcus genus are known for their capability to degrade a variety of organic compounds. The motility conferred by its flagella may play a significant role in its ability to colonize and metabolize substrates in diverse environments, thus contributing to nutrient cycling and ecological balance. Overall, Rhodococcus sp. AG1013 exemplifies the intricate relationships between microbial motility, genomic organization, and ecological interactions, highlighting its potential significance in both natural ecosystems and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. AG1013
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. AG1013 Ga0222397_155, whole genome shotgun

Gene Summary

Adenine Count

921410 bp

Thymine Count

940301 bp

Guanine Count

2023219 bp

Cytosine Count

1978588 bp

Genome Length

5864498 bp

Protein-coding Genes

5519 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phnb proteinDEU38_101195Not AvailablePositive189246 - 18964414393.2
sugar phosphate permeaseDEU38_101196Not AvailableNegative189634 - 19098648261.6
pyridoxamine 5'-phosphate oxidaseDEU38_101197Not AvailablePositive191107 - 19182326284.6
enoyl-coa hydrataseDEU38_101198Not AvailablePositive191853 - 19289036827.4
two-component system sensor histidine kinase prrbDEU38_101199Not AvailableNegative192897 - 19420145285.9
winged helix family two component transcriptional regulatorDEU38_101200Not AvailableNegative194198 - 19489925228.6
hypothetical proteinDEU38_101201Not AvailableNegative194922 - 19532313218.2
putative f420-dependent oxidoreductaseDEU38_101202Not AvailableNegative195432 - 19629530487.4
nicotinamide mononucleotide transporterDEU38_101203Not AvailableNegative196324 - 19700425016.6
peptide chain release factor 3 (brf-3)DEU38_101204Not AvailableNegative197004 - 19869261101.8

Displaying genes 371 – 380 of 5687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.