Rhodococcus sp. AG1013

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. AG1013 is a notable bacterial strain characterized by the presence of flagella, which suggests motility capabilities. This trait may facilitate its movement through various environments, potentially enhancing its interactions with other microorganisms and its ecological niche. The strain possesses a single replicon, indicating a streamlined genomic structure. This could reflect a certain level of evolutionary adaptation, allowing for efficient replication and maintenance of essential genetic functions. The genetic material of Rhodococcus sp. AG1013 is cataloged under the accession number QQAT00000000.1, providing a reference point for further genomic studies and comparisons with other related species. Understanding the traits of Rhodococcus sp. AG1013 is crucial for recognizing its potential applications in bioremediation or industrial biotechnology, as members of the Rhodococcus genus are known for their capability to degrade a variety of organic compounds. The motility conferred by its flagella may play a significant role in its ability to colonize and metabolize substrates in diverse environments, thus contributing to nutrient cycling and ecological balance. Overall, Rhodococcus sp. AG1013 exemplifies the intricate relationships between microbial motility, genomic organization, and ecological interactions, highlighting its potential significance in both natural ecosystems and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. AG1013
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. AG1013 Ga0222397_155, whole genome shotgun

Gene Summary

Adenine Count

921410 bp

Thymine Count

940301 bp

Guanine Count

2023219 bp

Cytosine Count

1978588 bp

Genome Length

5864498 bp

Protein-coding Genes

5519 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
8-oxo-dgtp pyrophosphatase mutt (nudix family)DEU38_10990Not AvailableNegative2828364 - 282892120076.5
coenzyme f420-0:l-glutamate ligase/coenzyme f420-1:gamma-l-glutamate ligaseDEU38_10991Not AvailableNegative2828922 - 283029849238.8
lppg:fo 2-phospho-l-lactate transferaseDEU38_10992Not AvailableNegative2830295 - 283129935419.2
transcription factor whibDEU38_10993Not AvailablePositive2831606 - 283199814650.1
zinicin-like metallopeptidaseDEU38_10994Not AvailableNegative2832006 - 283242215449.3
uncharacterized protein duf3499DEU38_10995Not AvailablePositive2832608 - 283302714707.2
phosphomannomutaseDEU38_10996Not AvailablePositive2833237 - 283461948702.4
hypothetical proteinDEU38_10997Not AvailablePositive2834698 - 283583739107.7
mannose-6-phosphate isomerase type 1DEU38_10998Not AvailablePositive2835837 - 283708444010.9
cation diffusion facilitator family transporterDEU38_10999Not AvailablePositive2837132 - 283805232469.7

Displaying genes 2811 – 2820 of 5687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.