Rhodococcus sp. AG1013

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. AG1013 is a notable bacterial strain characterized by the presence of flagella, which suggests motility capabilities. This trait may facilitate its movement through various environments, potentially enhancing its interactions with other microorganisms and its ecological niche. The strain possesses a single replicon, indicating a streamlined genomic structure. This could reflect a certain level of evolutionary adaptation, allowing for efficient replication and maintenance of essential genetic functions. The genetic material of Rhodococcus sp. AG1013 is cataloged under the accession number QQAT00000000.1, providing a reference point for further genomic studies and comparisons with other related species. Understanding the traits of Rhodococcus sp. AG1013 is crucial for recognizing its potential applications in bioremediation or industrial biotechnology, as members of the Rhodococcus genus are known for their capability to degrade a variety of organic compounds. The motility conferred by its flagella may play a significant role in its ability to colonize and metabolize substrates in diverse environments, thus contributing to nutrient cycling and ecological balance. Overall, Rhodococcus sp. AG1013 exemplifies the intricate relationships between microbial motility, genomic organization, and ecological interactions, highlighting its potential significance in both natural ecosystems and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. AG1013
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. AG1013 Ga0222397_155, whole genome shotgun

Gene Summary

Adenine Count

921410 bp

Thymine Count

940301 bp

Guanine Count

2023219 bp

Cytosine Count

1978588 bp

Genome Length

5864498 bp

Protein-coding Genes

5519 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose transport system substrate-binding proteinDEU38_10693Not AvailablePositive2146319 - 214748239527.6
monosaccharide abc transporter atp-binding protein (cut2 family)DEU38_10694Not AvailablePositive2147517 - 214902854520.0
monosaccharide abc transporter membrane protein (cut2 family)DEU38_10695Not AvailablePositive2148991 - 215002235498.3
sdr family mycofactocin-dependent oxidoreductaseDEU38_10696Not AvailablePositive2150056 - 215088929398.1
enamine deaminase rida (yjgf/yer057c/uk114 family)DEU38_10697Not AvailablePositive2150889 - 215129914085.6
(2fe-2s) ferredoxinDEU38_10698Not AvailableNegative2151314 - 215207827507.1
iron complex transport system atp-binding proteinDEU38_10699Not AvailableNegative2152075 - 215288728893.7
iron complex transport system permease proteinDEU38_106100Not AvailableNegative2152884 - 215394235249.9
iron complex transport system substrate-binding proteinDEU38_106101Not AvailableNegative2153939 - 215497335938.6
emrb/qaca subfamily drug resistance transporterDEU38_106103Not AvailableNegative2155154 - 215661750724.9

Displaying genes 2161 – 2170 of 5687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.