Rhodococcus sp. AG1013

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. AG1013 is a notable bacterial strain characterized by the presence of flagella, which suggests motility capabilities. This trait may facilitate its movement through various environments, potentially enhancing its interactions with other microorganisms and its ecological niche. The strain possesses a single replicon, indicating a streamlined genomic structure. This could reflect a certain level of evolutionary adaptation, allowing for efficient replication and maintenance of essential genetic functions. The genetic material of Rhodococcus sp. AG1013 is cataloged under the accession number QQAT00000000.1, providing a reference point for further genomic studies and comparisons with other related species. Understanding the traits of Rhodococcus sp. AG1013 is crucial for recognizing its potential applications in bioremediation or industrial biotechnology, as members of the Rhodococcus genus are known for their capability to degrade a variety of organic compounds. The motility conferred by its flagella may play a significant role in its ability to colonize and metabolize substrates in diverse environments, thus contributing to nutrient cycling and ecological balance. Overall, Rhodococcus sp. AG1013 exemplifies the intricate relationships between microbial motility, genomic organization, and ecological interactions, highlighting its potential significance in both natural ecosystems and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. AG1013
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. AG1013 Ga0222397_155, whole genome shotgun

Gene Summary

Adenine Count

921410 bp

Thymine Count

940301 bp

Guanine Count

2023219 bp

Cytosine Count

1978588 bp

Genome Length

5864498 bp

Protein-coding Genes

5519 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative mate family efflux proteinDEU38_104172Not AvailablePositive1664211 - 166558147123.4
3',5'-cyclic amp phosphodiesterase cpdaDEU38_104173Not AvailablePositive1665601 - 166650934671.1
4'-phosphopantetheinyl transferase entdDEU38_104174Not AvailablePositive1666521 - 166719524041.7
trna pseudouridine synthase bDEU38_104175Not AvailablePositive1667245 - 166817132375.6
hypothetical proteinDEU38_104176Not AvailableNegative1668181 - 166859114391.9
dtxr family iron (metal) dependent repressorDEU38_104177Not AvailableNegative1668644 - 166935425879.4
riboflavin kinase/fmn adenylyltransferaseDEU38_104178Not AvailablePositive1669570 - 167051433931.4
ssu ribosomal protein s15pDEU38_104179Not AvailablePositive1670650 - 167091910481.0
polyribonucleotide nucleotidyltransferaseDEU38_104180Not AvailablePositive1671202 - 167349381009.3
putative zn-dependent peptidaseDEU38_104181Not AvailablePositive1673641 - 167499048787.1

Displaying genes 1691 – 1700 of 5687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.