Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase accessory protein ccog | DU508_00340 | Not Available | Positive | 55535 - 56914 | 52446.6 |
| hypothetical protein | DU508_00345 | Not Available | Positive | 56946 - 57407 | 17833.7 |
| sulfite exporter taue/safe family protein | DU508_00350 | Not Available | Positive | 57407 - 58105 | 25775.7 |
| tetr/acrr family transcriptional regulator | DU508_00355 | Not Available | Positive | 58453 - 59058 | 23256.2 |
| efflux rnd transporter periplasmic adaptor subunit | DU508_00360 | Not Available | Positive | 59128 - 60330 | 43026.8 |
| acrb/acrd/acrf family protein | DU508_00365 | Not Available | Positive | 60341 - 63532 | 115450.0 |
| tolc family protein | DU508_00370 | Not Available | Positive | 63519 - 64925 | 51119.8 |
| na+/h+ antiporter nhaa | DU508_00375 | Not Available | Negative | 65250 - 66404 | 41424.4 |
| type ix secretion system membrane protein porp/sprf | DU508_00380 | Not Available | Negative | 66587 - 67507 | 34082.4 |
| hypothetical protein | DU508_00385 | Not Available | Negative | 67516 - 73269 | 198800.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

