Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_00290 | Not Available | Positive | 43669 - 45447 | 67355.6 |
| pas domain s-box protein | DU508_00295 | Not Available | Positive | 45508 - 46698 | 44838.6 |
| response regulator | DU508_00300 | Not Available | Positive | 46710 - 47741 | 38235.1 |
| lactate dehydrogenase | DU508_00305 | Not Available | Positive | 47854 - 48282 | 15444.8 |
| oxygen-independent coproporphyrinogen iii oxidase | DU508_00310 | Not Available | Positive | 48282 - 49625 | 51090.1 |
| had family hydrolase | DU508_00315 | Not Available | Positive | 49638 - 52022 | 89153.9 |
| cbb3-type cytochrome oxidase assembly protein ccos | DU508_00320 | Not Available | Positive | 52019 - 52198 | 6859.07 |
| cytochrome-c oxidase, cbb3-type subunit i | DU508_00325 | Not Available | Positive | 52274 - 54415 | 80833.5 |
| hypothetical protein | DU508_00330 | Not Available | Positive | 54420 - 54602 | 6947.66 |
| cytochrome c | DU508_00335 | Not Available | Positive | 54784 - 55551 | 28769.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

