Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | DU508_00240 | Not Available | Positive | 34997 - 35467 | 18056.3 |
| gxxexxy protein | DU508_00245 | Not Available | Negative | 35522 - 35944 | 16196.2 |
| uracil-dna glycosylase | DU508_00250 | Not Available | Negative | 36052 - 36729 | 25357.4 |
| thioredoxin | DU508_00255 | Not Available | Negative | 36819 - 37337 | 19489.1 |
| duf2892 domain-containing protein | DU508_00260 | Not Available | Positive | 37454 - 37993 | 20555.8 |
| sodium:proton antiporter | DU508_00265 | Not Available | Positive | 38143 - 39390 | 45311.0 |
| duf1905 domain-containing protein | DU508_00270 | Not Available | Negative | 39865 - 40362 | 19078.2 |
| general stress protein | DU508_00275 | Not Available | Positive | 40487 - 41041 | 20271.8 |
| hypothetical protein | DU508_00280 | Not Available | Negative | 41199 - 41411 | 8244.74 |
| lysine--trna ligase | DU508_00285 | Not Available | Negative | 41547 - 43256 | 64836.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

