Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family peptidase | DU508_00140 | Not Available | Negative | 18174 - 18986 | 30174.0 |
| hypothetical protein | DU508_00145 | Not Available | Negative | 19005 - 19382 | 14027.6 |
| transcriptional regulator | DU508_00150 | Not Available | Negative | 19890 - 20246 | 13735.0 |
| sdr family nad(p)-dependent oxidoreductase | DU508_00155 | Not Available | Positive | 20372 - 21166 | 28416.1 |
| nuclear transport factor 2 family protein | DU508_00160 | Not Available | Positive | 21249 - 21572 | 11862.1 |
| hypothetical protein | DU508_00165 | Not Available | Negative | 21698 - 21955 | 10199.9 |
| 50s ribosomal protein l34 | DU508_00170 | Not Available | Positive | 21954 - 22112 | 6263.67 |
| ribonuclease p protein component | DU508_00175 | Not Available | Positive | 22180 - 22578 | 15986.7 |
| membrane protein insertion efficiency factor yidd | DU508_00180 | Not Available | Positive | 22562 - 22792 | 8742.92 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DU508_00185 | Not Available | Positive | 22908 - 23594 | 25205.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

