Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_00085 | Not Available | Negative | 8425 - 8715 | 10495.8 |
| type ix secretion system membrane protein porp/sprf | DU508_00090 | Not Available | Positive | 8882 - 9892 | 37512.7 |
| pkd domain-containing protein | DU508_00095 | Not Available | Negative | 9893 - 11917 | 73280.7 |
| hypothetical protein | DU508_00100 | Not Available | Positive | 12500 - 13351 | 32022.9 |
| hypothetical protein | DU508_00105 | Not Available | Positive | 13369 - 14097 | 27157.8 |
| hypothetical protein | DU508_00115 | Not Available | Positive | 14958 - 15146 | 7149.51 |
| prc-barrel domain containing protein | DU508_00120 | Not Available | Negative | 15758 - 16342 | 22025.3 |
| ompa family protein | DU508_00125 | Not Available | Negative | 16360 - 16989 | 22626.5 |
| hypothetical protein | DU508_00130 | Not Available | Positive | 17238 - 17576 | 11716.0 |
| sh3 domain-containing protein | DU508_00135 | Not Available | Positive | 17581 - 17997 | 15005.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

