Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosylasparaginase | DU508_01325 | Not Available | Negative | 315009 - 316043 | 37155.6 |
| nitrilase family protein | DU508_01330 | Not Available | Negative | 316105 - 316884 | 30346.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DU508_01335 | Not Available | Negative | 316930 - 318075 | 42965.9 |
| duf2271 domain-containing protein | DU508_01340 | Not Available | Positive | 318265 - 319797 | 56473.2 |
| peptidase | DU508_01345 | Not Available | Positive | 319913 - 320452 | 19973.2 |
| mfs transporter | DU508_01350 | Not Available | Negative | 320623 - 321849 | 43960.0 |
| vut family protein | DU508_01355 | Not Available | Positive | 322015 - 322785 | 28683.8 |
| hypothetical protein | DU508_01360 | Not Available | Positive | 322814 - 323254 | 16599.8 |
| homoserine dehydrogenase | DU508_01365 | Not Available | Negative | 323417 - 324655 | 46486.5 |
| homoserine o-acetyltransferase | DU508_01370 | Not Available | Negative | 324798 - 325898 | 40876.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

