Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | DU508_01225 | Not Available | Positive | 297122 - 297691 | 21493.4 |
| 50s ribosomal protein l35 | DU508_01230 | Not Available | Positive | 297721 - 297921 | 7255.12 |
| 50s ribosomal protein l20 | DU508_01235 | Not Available | Positive | 297993 - 298337 | 12983.0 |
| cbs domain-containing protein | DU508_01240 | Not Available | Negative | 298672 - 300582 | 73521.7 |
| 3'-5' exonuclease | DU508_01245 | Not Available | Negative | 300587 - 301279 | 27224.4 |
| aquaporin family protein | DU508_01250 | Not Available | Negative | 301487 - 302218 | 25736.9 |
| glycerol kinase | DU508_01255 | Not Available | Negative | 302265 - 303755 | 54153.8 |
| glycerol-3-phosphate dehydrogenase/oxidase | DU508_01260 | Not Available | Negative | 303774 - 305333 | 57614.2 |
| deor/glpr transcriptional regulator | DU508_01265 | Not Available | Positive | 305531 - 306295 | 27941.0 |
| response regulator | DU508_01270 | Not Available | Positive | 306337 - 306729 | 14880.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

