Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DU508_01075 | Not Available | Positive | 257198 - 257575 | 13993.1 |
| dna topoisomerase iii | DU508_01080 | Not Available | Negative | 257572 - 259422 | 69295.3 |
| hypothetical protein | DU508_01085 | Not Available | Positive | 259587 - 260030 | 17295.1 |
| hypothetical protein | DU508_01090 | Not Available | Negative | 260027 - 260812 | 28772.1 |
| duf3857 domain-containing protein | DU508_01095 | Not Available | Negative | 261937 - 263844 | 72605.8 |
| duf3857 domain-containing protein | DU508_01100 | Not Available | Negative | 263846 - 265819 | 75008.4 |
| dna polymerase iii subunit epsilon | DU508_01105 | Not Available | Positive | 266005 - 266958 | 36311.4 |
| peptidase | DU508_01110 | Not Available | Positive | 266984 - 268843 | 70168.1 |
| hypothetical protein | DU508_01115 | Not Available | Negative | 269226 - 270059 | 31174.0 |
| trna epoxyqueuosine(34) reductase queg | DU508_01120 | Not Available | Negative | 270193 - 271125 | 35285.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

