Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene/squalene synthase family protein | DU508_01030 | Not Available | Positive | 250422 - 251258 | 32567.6 |
| isopentenyl-diphosphate delta-isomerase | DU508_01035 | Not Available | Positive | 251263 - 251787 | 20467.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 251377 - 251488 | Not Available |
| endonuclease | DU508_01040 | Not Available | Negative | 252057 - 252794 | 28709.9 |
| ktsc domain-containing protein | DU508_01045 | Not Available | Negative | 252796 - 252996 | 7674.25 |
| hypothetical protein | DU508_01050 | Not Available | Negative | 253041 - 253421 | 15195.7 |
| hypothetical protein | DU508_01055 | Not Available | Positive | 253527 - 253715 | 6886.09 |
| aminotransferase class i and ii | DU508_01060 | Not Available | Positive | 253823 - 254614 | 30066.9 |
| duf3037 domain-containing protein | DU508_01065 | Not Available | Positive | 254592 - 254975 | 14527.7 |
| duf2075 domain-containing protein | DU508_01070 | Not Available | Positive | 255094 - 257007 | 71906.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

