Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose:h+ symporter permease | DU508_00830 | Not Available | Positive | 200460 - 201752 | 46685.0 |
| dna-binding protein | DU508_00835 | Not Available | Positive | 201809 - 205234 | 127626.0 |
| glycoside hydrolase family 127 protein | DU508_00840 | Not Available | Positive | 205238 - 207262 | 75672.3 |
| hypothetical protein | DU508_00845 | Not Available | Positive | 207383 - 209698 | 89039.2 |
| short chain dehydrogenase | DU508_00850 | Not Available | Positive | 209958 - 210746 | 28090.4 |
| alcohol dehydrogenase | DU508_00855 | Not Available | Positive | 211271 - 212290 | 37228.9 |
| hypothetical protein | DU508_00860 | Not Available | Negative | 212935 - 213969 | 37713.3 |
| tonb-dependent receptor | DU508_00865 | Not Available | Negative | 213992 - 216070 | 77346.5 |
| arac family transcriptional regulator | DU508_00870 | Not Available | Positive | 216172 - 217104 | 36038.4 |
| laci family transcriptional regulator | DU508_00875 | Not Available | Negative | 217132 - 218148 | 38135.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

