Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialidase | DU508_00735 | Not Available | Positive | 169698 - 170834 | 41922.6 |
| acetylxylan esterase | DU508_00740 | Not Available | Positive | 171320 - 172699 | 52203.7 |
| sugar phosphate isomerase/epimerase | DU508_00745 | Not Available | Positive | 172699 - 173601 | 33469.9 |
| l-rhamnose mutarotase | DU508_00750 | Not Available | Positive | 173705 - 176230 | 95430.7 |
| hypothetical protein | DU508_00755 | Not Available | Positive | 176385 - 176597 | 8290.48 |
| gfo/idh/moca family oxidoreductase | DU508_00760 | Not Available | Positive | 177181 - 178266 | 40969.0 |
| na+/glucose cotransporter | DU508_00765 | Not Available | Positive | 178451 - 180040 | 58564.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 179879 - 180256 | Not Available |
| alpha-rhamnosidase | DU508_00770 | Not Available | Positive | 180113 - 182278 | 82663.8 |
| iclr family transcriptional regulator | DU508_00775 | Not Available | Negative | 182375 - 183148 | 28660.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

