Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | DU508_04910 | Not Available | Positive | 1125893 - 1127659 | 64919.1 |
| hypothetical protein | DU508_04915 | Not Available | Negative | 1127757 - 1128383 | 23079.6 |
| dna polymerase/3'-5' exonuclease polx | DU508_04920 | Not Available | Positive | 1128608 - 1130284 | 63250.9 |
| duf4254 domain-containing protein | DU508_04925 | Not Available | Positive | 1131138 - 1131740 | 23425.6 |
| lipopolysaccharide heptosyltransferase family protein | DU508_04930 | Not Available | Positive | 1131776 - 1132807 | 38780.3 |
| histidine phosphatase family protein | DU508_04935 | Not Available | Positive | 1132800 - 1133297 | 18514.9 |
| hypothetical protein | DU508_04940 | Not Available | Positive | 1133739 - 1133924 | 7187.97 |
| duf4290 domain-containing protein | DU508_04945 | Not Available | Positive | 1134038 - 1134715 | 26246.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DU508_04950 | Not Available | Positive | 1134812 - 1136137 | 48195.0 |
| pyridoxal-phosphate dependent enzyme | DU508_04955 | Not Available | Negative | 1136320 - 1137681 | 49726.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

