Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna translocase ftsk | DU508_04860 | Not Available | Negative | 1115074 - 1117668 | 96737.4 |
| ankyrin repeat domain-containing protein | DU508_04865 | Not Available | Positive | 1118130 - 1118786 | 23642.4 |
| pspc family transcriptional regulator | DU508_04870 | Not Available | Negative | 1118854 - 1119072 | 8663.85 |
| hypothetical protein | DU508_04875 | Not Available | Negative | 1119212 - 1119427 | 8446.17 |
| duf2851 family protein | DU508_04880 | Not Available | Negative | 1119494 - 1120777 | 49702.7 |
| orotidine-5'-phosphate decarboxylase | DU508_04885 | Not Available | Negative | 1121039 - 1121869 | 30910.0 |
| transcription termination factor rho | DU508_04890 | Not Available | Positive | 1122287 - 1123987 | 63199.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DU508_04895 | Not Available | Positive | 1124107 - 1124808 | 25866.3 |
| hpt domain-containing protein | DU508_04900 | Not Available | Negative | 1124954 - 1125328 | 14424.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DU508_04905 | Not Available | Negative | 1125346 - 1125852 | 19104.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

