Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1107433 - 1107516 | Not Available |
| mbl fold metallo-hydrolase | DU508_04815 | Not Available | Negative | 1107562 - 1108326 | 29063.9 |
| hypothetical protein | DU508_04820 | Not Available | Negative | 1108376 - 1108648 | 10277.5 |
| tlpa family protein disulfide reductase | DU508_04825 | Not Available | Negative | 1108776 - 1109957 | 45859.1 |
| hypothetical protein | DU508_04830 | Not Available | Positive | 1110141 - 1111196 | 41169.4 |
| dna-binding response regulator | DU508_04835 | Not Available | Positive | 1111196 - 1111870 | 25725.6 |
| arac family transcriptional regulator | DU508_04840 | Not Available | Negative | 1111908 - 1112720 | 31546.5 |
| sdr family nad(p)-dependent oxidoreductase | DU508_04845 | Not Available | Negative | 1112873 - 1113769 | 32293.6 |
| hypothetical protein | DU508_04850 | Not Available | Negative | 1114091 - 1114336 | 9339.41 |
| outer membrane lipoprotein carrier protein lola | DU508_04855 | Not Available | Negative | 1114358 - 1115008 | 24277.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

