Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinan endo-1,5-alpha-l-arabinosidase | DU508_04760 | Not Available | Negative | 1096037 - 1097017 | 37092.9 |
| dipeptidase | DU508_04765 | Not Available | Negative | 1097250 - 1098620 | 50716.2 |
| t9ss c-terminal target domain-containing protein | DU508_04770 | Not Available | Positive | 1098889 - 1099863 | 36114.4 |
| ph domain-containing protein | DU508_04775 | Not Available | Positive | 1099922 - 1100467 | 20493.5 |
| hypothetical protein | DU508_04780 | Not Available | Positive | 1100467 - 1101975 | 57377.8 |
| duf493 family protein | DU508_04785 | Not Available | Negative | 1102597 - 1102920 | 12216.8 |
| aldo/keto reductase | DU508_04790 | Not Available | Positive | 1103221 - 1104192 | 35640.8 |
| voc family protein | DU508_04795 | Not Available | Positive | 1104618 - 1104995 | 14719.3 |
| arac family transcriptional regulator | DU508_04800 | Not Available | Positive | 1105108 - 1105866 | 29046.6 |
| fad-dependent monooxygenase | DU508_04805 | Not Available | Positive | 1105888 - 1107045 | 43760.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

