Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | DU508_04705 | Not Available | Negative | 1082103 - 1085363 | 116501.0 |
| methylmalonyl-coa epimerase | DU508_04710 | Not Available | Negative | 1085872 - 1086279 | 15168.3 |
| iscs subfamily cysteine desulfurase | DU508_04715 | Not Available | Positive | 1086399 - 1087610 | 44245.0 |
| fe-s cluster assembly scaffold iscu | DU508_04720 | Not Available | Positive | 1087821 - 1088234 | 14846.7 |
| iron-sulfur cluster assembly accessory protein | DU508_04725 | Not Available | Positive | 1088323 - 1088649 | 11856.9 |
| long-chain fatty acid--coa ligase | DU508_04730 | Not Available | Positive | 1089531 - 1091447 | 71967.2 |
| winged helix family transcriptional regulator | DU508_04735 | Not Available | Negative | 1091546 - 1092436 | 33594.4 |
| ycei family protein | DU508_04745 | Not Available | Positive | 1092895 - 1093536 | 23637.6 |
| hypothetical protein | DU508_04750 | Not Available | Positive | 1093635 - 1094321 | 25953.4 |
| mfs transporter | DU508_04755 | Not Available | Positive | 1094772 - 1096019 | 46009.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

