Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DU508_04655 | Not Available | Negative | 1069311 - 1070954 | 62152.1 |
| susc/raga family tonb-linked outer membrane protein | DU508_04660 | Not Available | Negative | 1070966 - 1074184 | 119281.0 |
| duf4974 domain-containing protein | DU508_04665 | Not Available | Negative | 1074581 - 1075729 | 43292.0 |
| hth domain-containing protein | DU508_04670 | Not Available | Negative | 1075836 - 1076414 | 22284.2 |
| xre family transcriptional regulator | DU508_04675 | Not Available | Negative | 1076552 - 1076872 | 11701.4 |
| peptidoglycan synthetase | DU508_04680 | Not Available | Negative | 1076908 - 1078260 | 50456.4 |
| 50s ribosomal protein l11 methyltransferase | DU508_04685 | Not Available | Negative | 1078385 - 1079233 | 32070.8 |
| triose-phosphate isomerase | DU508_04690 | Not Available | Negative | 1079233 - 1079994 | 27660.9 |
| glucose-1-phosphate thymidylyltransferase | DU508_04695 | Not Available | Negative | 1080091 - 1081257 | 43062.1 |
| type b 50s ribosomal protein l31 | DU508_04700 | Not Available | Negative | 1081330 - 1081578 | 9683.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

