Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin-like domain-containing protein | DU508_04605 | Not Available | Negative | 1054812 - 1055534 | 25518.0 |
| dna-binding response regulator | DU508_04610 | Not Available | Positive | 1055657 - 1056442 | 29440.3 |
| diguanylate cyclase | DU508_04615 | Not Available | Positive | 1056432 - 1059437 | 114974.0 |
| smc-scp complex subunit scpb | DU508_04620 | Not Available | Positive | 1059689 - 1060255 | 21618.8 |
| hypothetical protein | DU508_04625 | Not Available | Positive | 1060343 - 1060537 | 7495.14 |
| gnat family n-acetyltransferase | DU508_04630 | Not Available | Positive | 1060613 - 1061731 | 43203.9 |
| eama family transporter | DU508_04635 | Not Available | Negative | 1064172 - 1065062 | 32228.5 |
| lrp/asnc family transcriptional regulator | DU508_04640 | Not Available | Negative | 1065100 - 1065579 | 17609.6 |
| glycosyl hydrolase family 76 | DU508_04645 | Not Available | Negative | 1066971 - 1068086 | 42176.6 |
| hypothetical protein | DU508_04650 | Not Available | Negative | 1068138 - 1069283 | 41831.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

