Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class c beta-lactamase-related serine hydrolase | DU508_04555 | Not Available | Positive | 1046861 - 1048333 | 56908.1 |
| arsr family transcriptional regulator | DU508_04560 | Not Available | Positive | 1048634 - 1048954 | 12378.1 |
| atpase | DU508_04565 | Not Available | Positive | 1048957 - 1049421 | 18243.0 |
| doxx family protein | DU508_04570 | Not Available | Positive | 1049424 - 1049825 | 14673.5 |
| hypothetical protein | DU508_04575 | Not Available | Positive | 1049850 - 1050428 | 22451.2 |
| transcriptional regulator | DU508_04580 | Not Available | Negative | 1050626 - 1050964 | 12767.7 |
| sdr family nad(p)-dependent oxidoreductase | DU508_04585 | Not Available | Positive | 1051073 - 1051951 | 32713.6 |
| sdr family nad(p)-dependent oxidoreductase | DU508_04590 | Not Available | Positive | 1051971 - 1052882 | 33383.6 |
| hypothetical protein | DU508_04595 | Not Available | Positive | 1052998 - 1053180 | 6763.1 |
| ferritin-like domain-containing protein | DU508_04600 | Not Available | Negative | 1053933 - 1054793 | 30817.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

