Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2147 domain-containing protein | DU508_04455 | Not Available | Negative | 1022613 - 1023044 | 16302.9 |
| doxx family protein | DU508_04460 | Not Available | Negative | 1023148 - 1023528 | 14090.2 |
| hypothetical protein | DU508_04465 | Not Available | Negative | 1023648 - 1024058 | 15844.8 |
| dinb family protein | DU508_04470 | Not Available | Negative | 1024073 - 1024573 | 19282.2 |
| dinb family protein | DU508_04475 | Not Available | Negative | 1024578 - 1025072 | 18675.7 |
| helix-turn-helix domain-containing protein | DU508_04480 | Not Available | Positive | 1025204 - 1026166 | 36193.2 |
| dna-binding response regulator | DU508_04485 | Not Available | Negative | 1026244 - 1027005 | 29255.5 |
| histidine kinase | DU508_04490 | Not Available | Negative | 1026986 - 1028005 | 38968.3 |
| abc transporter atp-binding protein | DU508_04495 | Not Available | Positive | 1028314 - 1029903 | 59100.3 |
| tetr/acrr family transcriptional regulator | DU508_04500 | Not Available | Positive | 1029923 - 1030516 | 22836.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

