Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DU508_04405 | Not Available | Negative | 1011186 - 1012994 | 66396.6 |
| susc/raga family tonb-linked outer membrane protein | DU508_04410 | Not Available | Negative | 1012997 - 1015855 | 105208.0 |
| chrd domain-containing protein | DU508_04415 | Not Available | Negative | 1015895 - 1016362 | 17115.6 |
| hypothetical protein | DU508_04420 | Not Available | Negative | 1017250 - 1017498 | 9738.41 |
| twin-arginine translocase tata/tate family subunit | DU508_04425 | Not Available | Negative | 1017738 - 1017923 | 6495.25 |
| response regulator | DU508_04430 | Not Available | Negative | 1018017 - 1018385 | 13534.4 |
| polyketide cyclase | DU508_04435 | Not Available | Positive | 1018665 - 1019084 | 16024.3 |
| 2og-fe(ii) oxygenase | DU508_04440 | Not Available | Negative | 1019903 - 1020496 | 23025.2 |
| dienelactone hydrolase family protein | DU508_04445 | Not Available | Positive | 1020727 - 1021590 | 31597.0 |
| oxidoreductase | DU508_04450 | Not Available | Negative | 1021591 - 1022607 | 36710.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

