Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_04355 | Not Available | Negative | 994933 - 995553 | 23418.6 |
| short chain dehydrogenase | DU508_04360 | Not Available | Negative | 995890 - 996672 | 28411.3 |
| altronate dehydratase | DU508_04365 | Not Available | Negative | 996789 - 998429 | 59747.4 |
| l-fucose:h+ symporter permease | DU508_04370 | Not Available | Negative | 998433 - 999716 | 46786.8 |
| arac family transcriptional regulator | DU508_04375 | Not Available | Positive | 1000043 - 1000906 | 33265.2 |
| beta-galactosidase | DU508_04380 | Not Available | Negative | 1001695 - 1003758 | 79287.6 |
| alpha-l-fucosidase | DU508_04385 | Not Available | Negative | 1003874 - 1005370 | 56642.1 |
| hypothetical protein | DU508_04390 | Not Available | Negative | 1005686 - 1006000 | 11991.8 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_04395 | Not Available | Negative | 1006254 - 1008080 | 68208.8 |
| tonb-dependent receptor | DU508_04400 | Not Available | Negative | 1008046 - 1011168 | 115700.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

