Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recx family transcriptional regulator | DU508_04305 | Not Available | Positive | 988448 - 988936 | 18581.6 |
| Trna-gly | Not Available | Not Available | Positive | 989030 - 989105 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 989152 - 989238 | Not Available |
| sdr family nad(p)-dependent oxidoreductase | DU508_04320 | Not Available | Positive | 989506 - 990273 | 27264.3 |
| short chain dehydrogenase | DU508_04325 | Not Available | Positive | 990358 - 990960 | 21396.1 |
| arac family transcriptional regulator | DU508_04330 | Not Available | Positive | 991004 - 991909 | 35141.4 |
| transglutaminase domain-containing protein | DU508_04335 | Not Available | Positive | 992043 - 992939 | 33999.6 |
| Trna-gly | Not Available | Not Available | Positive | 993200 - 993275 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 993323 - 993409 | Not Available |
| cytochrome c biogenesis protein cych | DU508_04350 | Not Available | Negative | 993458 - 994450 | 37716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

