Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylanthranilate isomerase | DU508_04255 | Not Available | Negative | 976496 - 977131 | 23994.1 |
| anthranilate phosphoribosyltransferase | DU508_04260 | Not Available | Negative | 977131 - 978117 | 36118.2 |
| short chain dehydrogenase | DU508_04265 | Not Available | Negative | 978440 - 979258 | 29488.4 |
| glycerophosphodiester phosphodiesterase | DU508_04270 | Not Available | Negative | 979305 - 980009 | 27135.5 |
| recombination protein recr | DU508_04275 | Not Available | Negative | 980042 - 980659 | 23012.9 |
| sodium:solute symporter | DU508_04280 | Not Available | Positive | 980824 - 982332 | 55864.2 |
| tigr00730 family rossman fold protein | DU508_04285 | Not Available | Positive | 982351 - 983058 | 26869.3 |
| hypothetical protein | DU508_04290 | Not Available | Positive | 983352 - 983846 | 19108.8 |
| duf502 domain-containing protein | DU508_04295 | Not Available | Negative | 985189 - 985779 | 21631.8 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DU508_04300 | Not Available | Negative | 985927 - 988386 | 92017.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

