Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | DU508_04205 | Not Available | Positive | 962380 - 963078 | 26713.4 |
| dna-binding response regulator | DU508_04210 | Not Available | Positive | 963131 - 963808 | 25390.1 |
| hamp domain-containing protein | DU508_04215 | Not Available | Positive | 963808 - 965160 | 52048.7 |
| tolc family protein | DU508_04220 | Not Available | Positive | 965220 - 966488 | 48260.6 |
| efflux rnd transporter periplasmic adaptor subunit | DU508_04225 | Not Available | Positive | 966495 - 967592 | 40218.3 |
| acrb/acrd/acrf family protein | DU508_04230 | Not Available | Positive | 967620 - 970748 | 116057.0 |
| peptide-methionine (s)-s-oxide reductase | DU508_04235 | Not Available | Negative | 971411 - 971902 | 18630.6 |
| hypothetical protein | DU508_04240 | Not Available | Negative | 972041 - 974134 | 79191.2 |
| tryptophan synthase subunit alpha | DU508_04245 | Not Available | Negative | 974372 - 975136 | 28116.8 |
| tryptophan synthase subunit beta | DU508_04250 | Not Available | Negative | 975243 - 976424 | 43137.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

