Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_04155 | Not Available | Negative | 951899 - 952402 | 19467.3 |
| hypothetical protein | DU508_04160 | Not Available | Negative | 952672 - 952905 | 8629.28 |
| rna polymerase sigma factor | DU508_04165 | Not Available | Positive | 953214 - 953735 | 20007.1 |
| hypothetical protein | DU508_04170 | Not Available | Negative | 953766 - 954368 | 22365.7 |
| hypothetical protein | DU508_04175 | Not Available | Negative | 954589 - 955452 | 31942.9 |
| duf1080 domain-containing protein | DU508_04180 | Not Available | Negative | 955524 - 958037 | 94392.7 |
| rna-binding protein | DU508_04185 | Not Available | Positive | 958315 - 958629 | 11444.2 |
| na+/h+ antiporter | DU508_04190 | Not Available | Positive | 958709 - 959965 | 45824.8 |
| galactokinase | DU508_04195 | Not Available | Negative | 960009 - 961160 | 42699.2 |
| udp-glucose--hexose-1-phosphate uridylyltransferase | DU508_04200 | Not Available | Negative | 961177 - 962226 | 40682.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

