Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 43 | DU508_04105 | Not Available | Negative | 935185 - 936231 | 39545.7 |
| glycosyl hydrolase family 43 | DU508_04110 | Not Available | Negative | 936233 - 937267 | 37743.2 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_04115 | Not Available | Negative | 937376 - 938914 | 57126.9 |
| tonb-dependent receptor | DU508_04120 | Not Available | Negative | 938932 - 942099 | 115074.0 |
| crp/fnr family transcriptional regulator | DU508_04125 | Not Available | Negative | 942542 - 943168 | 24592.8 |
| acyltransferase | DU508_04130 | Not Available | Negative | 943617 - 944723 | 41688.0 |
| hypothetical protein | DU508_04135 | Not Available | Negative | 945301 - 945498 | 7290.69 |
| duf3606 domain-containing protein | DU508_04140 | Not Available | Positive | 945766 - 945966 | 7676.1 |
| malto-oligosyltrehalose synthase | DU508_04145 | Not Available | Negative | 945997 - 950028 | 156193.0 |
| malto-oligosyltrehalose trehalohydrolase | DU508_04150 | Not Available | Negative | 950021 - 951898 | 72245.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

