Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_04055 | Not Available | Positive | 921805 - 921990 | 6344.54 |
| adenylosuccinate lyase | DU508_04060 | Not Available | Positive | 922114 - 923460 | 50516.1 |
| nifu family protein | DU508_04065 | Not Available | Positive | 923547 - 924098 | 20098.7 |
| hypothetical protein | DU508_04070 | Not Available | Positive | 924841 - 925080 | 9291.71 |
| inositol monophosphatase | DU508_04075 | Not Available | Negative | 925112 - 925903 | 29823.9 |
| diacylglyceryl transferase | DU508_04080 | Not Available | Negative | 925966 - 927114 | 42587.6 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DU508_04085 | Not Available | Negative | 927379 - 928701 | 49821.0 |
| ubix family flavin prenyltransferase | DU508_04090 | Not Available | Negative | 928837 - 929406 | 20931.2 |
| hybrid sensor histidine kinase/response regulator | DU508_04095 | Not Available | Negative | 929982 - 934019 | 153516.0 |
| 1,4-beta-xylanase | DU508_04100 | Not Available | Negative | 934070 - 935146 | 41587.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

