Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DU508_04005 | Not Available | Positive | 914435 - 914902 | 17919.5 |
| aspartate kinase | DU508_04010 | Not Available | Positive | 914904 - 916169 | 47617.7 |
| hypothetical protein | DU508_04015 | Not Available | Positive | 916254 - 917438 | 44364.4 |
| cold-shock protein | DU508_04020 | Not Available | Negative | 917674 - 917871 | 7285.74 |
| peroxiredoxin | DU508_04025 | Not Available | Negative | 918080 - 918715 | 23530.7 |
| serine protease | DU508_04030 | Not Available | Negative | 918874 - 919980 | 40781.3 |
| sigma-70 family rna polymerase sigma factor | DU508_04035 | Not Available | Negative | 919989 - 920555 | 21916.2 |
| hypothetical protein | DU508_04040 | Not Available | Positive | 920767 - 920970 | 6969.06 |
| hypothetical protein | DU508_04045 | Not Available | Positive | 921105 - 921323 | 7548.87 |
| hypothetical protein | DU508_04050 | Not Available | Positive | 921457 - 921675 | 7592.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

