Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_03955 | Not Available | Positive | 905267 - 905617 | 12509.5 |
| very short patch repair endonuclease | DU508_03960 | Not Available | Negative | 905641 - 906144 | 19743.1 |
| dna-binding protein | DU508_03965 | Not Available | Positive | 906559 - 907068 | 18657.7 |
| pap2 family protein | DU508_03970 | Not Available | Positive | 907137 - 907784 | 24798.5 |
| crp/fnr family transcriptional regulator | DU508_03975 | Not Available | Negative | 907794 - 908387 | 22816.9 |
| had family phosphatase | DU508_03980 | Not Available | Positive | 908565 - 909227 | 24449.2 |
| galactose mutarotase | DU508_03985 | Not Available | Negative | 909286 - 910440 | 42592.1 |
| endonuclease muts2 | DU508_03990 | Not Available | Negative | 910733 - 913111 | 89800.8 |
| duf4296 domain-containing protein | DU508_03995 | Not Available | Negative | 913113 - 913664 | 21050.9 |
| yggs family pyridoxal phosphate-dependent enzyme | DU508_04000 | Not Available | Positive | 913736 - 914434 | 26486.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

