Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prtrc system protein c | DU508_03900 | Not Available | Negative | 898041 - 898259 | 8239.04 |
| prtrc system protein e | DU508_03905 | Not Available | Negative | 898278 - 898898 | 23553.8 |
| molybdenum abc transporter atp-binding protein | DU508_03915 | Not Available | Negative | 899116 - 899454 | 13203.9 |
| hypothetical protein | DU508_03920 | Not Available | Negative | 899451 - 899948 | 19529.4 |
| dna-binding protein | DU508_03925 | Not Available | Negative | 899970 - 900167 | 7599.96 |
| duf945 domain-containing protein | DU508_03930 | Not Available | Negative | 900397 - 901470 | 39368.6 |
| single-stranded dna-binding protein | DU508_03935 | Not Available | Negative | 901519 - 901911 | 14382.7 |
| hypothetical protein | DU508_03940 | Not Available | Negative | 902314 - 902499 | 6917.64 |
| site-specific integrase | DU508_03945 | Not Available | Negative | 902562 - 903815 | 48392.7 |
| gfo/idh/moca family oxidoreductase | DU508_03950 | Not Available | Positive | 904135 - 905109 | 36282.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

