Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum abc transporter permease | DU508_03850 | Not Available | Positive | 888301 - 888579 | 10721.2 |
| dna-binding protein | DU508_03855 | Not Available | Positive | 888760 - 889071 | 12034.5 |
| dna-binding protein | DU508_03860 | Not Available | Positive | 889052 - 889342 | 11376.8 |
| dna polymerase iii subunit alpha | DU508_03865 | Not Available | Negative | 889343 - 892282 | 111608.0 |
| dna polymerase iv | DU508_03870 | Not Available | Negative | 892297 - 893436 | 42947.3 |
| helix-turn-helix domain-containing protein | DU508_03875 | Not Available | Positive | 893515 - 894288 | 29683.9 |
| dna-binding response regulator | DU508_03880 | Not Available | Positive | 894591 - 895040 | 16548.6 |
| prtrc system thif family protein | DU508_03885 | Not Available | Negative | 895319 - 896128 | 30557.2 |
| prtrc system protein b | DU508_03890 | Not Available | Negative | 896128 - 896850 | 27258.7 |
| hypothetical protein | DU508_03895 | Not Available | Negative | 896863 - 898023 | 45591.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

