Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trag family conjugative transposon atpase | DU508_03800 | Not Available | Positive | 879246 - 881750 | 95929.4 |
| duf4141 domain-containing protein | DU508_03805 | Not Available | Positive | 881778 - 882410 | 23744.6 |
| conjugative transposon protein traj | DU508_03810 | Not Available | Positive | 882413 - 883408 | 36629.9 |
| conjugative transposon protein trak | DU508_03815 | Not Available | Positive | 883430 - 884053 | 24232.8 |
| hypothetical protein | DU508_03820 | Not Available | Positive | 884067 - 884498 | 16573.0 |
| nitrogen regulatory iia protein | DU508_03825 | Not Available | Positive | 884519 - 884803 | 11302.8 |
| conjugative transposon protein tram | DU508_03830 | Not Available | Positive | 884790 - 886130 | 48805.6 |
| conjugative transposon protein tran | DU508_03835 | Not Available | Positive | 886217 - 887119 | 34260.2 |
| conjugal transfer protein trao | DU508_03840 | Not Available | Positive | 887141 - 887701 | 21185.4 |
| duf3872 domain-containing protein | DU508_03845 | Not Available | Positive | 887714 - 888163 | 17204.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

