Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trka family potassium uptake protein | DU508_03650 | Not Available | Positive | 845606 - 846298 | 25608.3 |
| arsenic resistance protein | DU508_03655 | Not Available | Positive | 846321 - 847265 | 34515.9 |
| sigma-54-dependent fis family transcriptional regulator | DU508_03660 | Not Available | Negative | 847270 - 848607 | 49492.8 |
| tetracycline regulation of excision, rtec | DU508_03665 | Not Available | Positive | 848797 - 849642 | 33186.7 |
| hypothetical protein | DU508_03670 | Not Available | Negative | 849661 - 849843 | 7111.76 |
| dna-binding protein | DU508_03675 | Not Available | Positive | 849895 - 850248 | 13901.6 |
| dna-binding protein | DU508_03680 | Not Available | Positive | 850254 - 850550 | 11641.1 |
| duf3945 domain-containing protein | DU508_03685 | Not Available | Positive | 850649 - 852106 | 55401.5 |
| type ia dna topoisomerase | DU508_03690 | Not Available | Positive | 852113 - 854197 | 77796.7 |
| orf6n domain-containing protein | DU508_03695 | Not Available | Positive | 854197 - 855078 | 33744.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

