Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | DU508_03550 | Not Available | Negative | 823194 - 823700 | 18846.9 |
| glucose/galactose mfs transporter | DU508_03555 | Not Available | Negative | 823833 - 825119 | 46595.7 |
| formylglycine-generating enzyme family protein | DU508_03560 | Not Available | Negative | 825211 - 826326 | 41515.6 |
| Trna-lys | Not Available | Not Available | Positive | 826508 - 826580 | Not Available |
| hypothetical protein | DU508_03570 | Not Available | Negative | 827397 - 828416 | 39361.9 |
| tetracycline regulation of excision, rtec | DU508_03575 | Not Available | Negative | 828621 - 829457 | 33329.1 |
| hamp domain-containing protein | DU508_03580 | Not Available | Negative | 829522 - 831258 | 64928.2 |
| sensor protein kdpd | DU508_03585 | Not Available | Negative | 831260 - 832384 | 42572.7 |
| glycosyltransferase | DU508_03590 | Not Available | Negative | 832384 - 833637 | 46380.4 |
| porin | DU508_03595 | Not Available | Negative | 833708 - 834790 | 40343.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

