Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_03495 | Not Available | Positive | 807409 - 809493 | 77781.0 |
| response regulator | DU508_03500 | Not Available | Positive | 809626 - 809982 | 13264.4 |
| hypothetical protein | DU508_03505 | Not Available | Positive | 810160 - 810915 | 28672.6 |
| cina family protein | DU508_03510 | Not Available | Positive | 811158 - 811646 | 17654.6 |
| sdr family nad(p)-dependent oxidoreductase | DU508_03515 | Not Available | Negative | 811853 - 812611 | 27319.1 |
| crp/fnr family transcriptional regulator | DU508_03520 | Not Available | Negative | 812852 - 813466 | 23807.1 |
| duf763 domain-containing protein | DU508_03525 | Not Available | Positive | 814080 - 815282 | 44867.8 |
| glutamate synthase subunit beta | DU508_03530 | Not Available | Negative | 815592 - 817058 | 53312.9 |
| glutamate synthase large subunit | DU508_03535 | Not Available | Negative | 817062 - 821561 | 164664.0 |
| fructose-6-phosphate aldolase | DU508_03545 | Not Available | Positive | 822162 - 822821 | 23220.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

