Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_03445 | Not Available | Positive | 794618 - 794938 | 12503.0 |
| glycoside hydrolase family 92 protein | DU508_03450 | Not Available | Negative | 796145 - 798430 | 86330.7 |
| hypothetical protein | DU508_03455 | Not Available | Positive | 798483 - 798716 | 8855.12 |
| trna 2-thiouridine(34) synthase mnma | DU508_03460 | Not Available | Positive | 798804 - 799895 | 40491.3 |
| glycoside hydrolase family 15 protein | DU508_03465 | Not Available | Positive | 800062 - 801879 | 69769.8 |
| sdr family nad(p)-dependent oxidoreductase | DU508_03470 | Not Available | Negative | 801881 - 802651 | 28129.0 |
| duf421 domain-containing protein | DU508_03475 | Not Available | Negative | 802809 - 803321 | 19128.8 |
| hypothetical protein | DU508_03480 | Not Available | Negative | 803339 - 803530 | 7448.64 |
| fad-binding oxidoreductase | DU508_03485 | Not Available | Negative | 803615 - 806440 | 103961.0 |
| hypothetical protein | DU508_03490 | Not Available | Positive | 806583 - 807257 | 26130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

