Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubid family decarboxylase | DU508_03395 | Not Available | Negative | 782792 - 784627 | 67692.5 |
| dna starvation/stationary phase protection protein | DU508_03400 | Not Available | Negative | 784733 - 785212 | 18484.1 |
| lysm peptidoglycan-binding domain-containing protein | DU508_03405 | Not Available | Positive | 785495 - 787018 | 55617.5 |
| uridine kinase | DU508_03410 | Not Available | Positive | 787015 - 787665 | 25024.9 |
| coa transferase subunit b | DU508_03415 | Not Available | Negative | 787766 - 788428 | 23521.0 |
| coa transferase subunit a | DU508_03420 | Not Available | Negative | 788478 - 789179 | 25447.8 |
| l-glyceraldehyde 3-phosphate reductase | DU508_03425 | Not Available | Positive | 789824 - 790813 | 37061.3 |
| nadp-dependent oxidoreductase | DU508_03430 | Not Available | Negative | 790924 - 791853 | 33590.8 |
| nad-dependent succinate-semialdehyde dehydrogenase | DU508_03435 | Not Available | Negative | 791862 - 793235 | 49507.0 |
| duf3095 domain-containing protein | DU508_03440 | Not Available | Negative | 793289 - 794473 | 44891.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

