Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | DU508_03345 | Not Available | Negative | 769534 - 770832 | 48922.5 |
| hypothetical protein | DU508_03350 | Not Available | Positive | 771235 - 771417 | 7059.36 |
| dna-binding response regulator | DU508_03355 | Not Available | Negative | 771588 - 772235 | 23732.8 |
| crp/fnr family transcriptional regulator | DU508_03360 | Not Available | Negative | 773075 - 773689 | 24047.2 |
| tigr02757 family protein | DU508_03365 | Not Available | Negative | 773811 - 774662 | 33250.8 |
| cystathionine gamma-synthase | DU508_03370 | Not Available | Negative | 774768 - 775907 | 42121.5 |
| proline--trna ligase | DU508_03375 | Not Available | Negative | 776079 - 777551 | 55580.3 |
| hypothetical protein | DU508_03380 | Not Available | Positive | 777751 - 778710 | 34641.9 |
| hypothetical protein | DU508_03385 | Not Available | Positive | 778737 - 780275 | 56236.9 |
| hypothetical protein | DU508_03390 | Not Available | Negative | 780340 - 782745 | 90191.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

