Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose dehydrogenase | DU508_03195 | Not Available | Negative | 734402 - 735607 | 44618.6 |
| hypothetical protein | DU508_03200 | Not Available | Positive | 735613 - 735819 | 8048.94 |
| rna polymerase sigma factor | DU508_03205 | Not Available | Positive | 735902 - 736420 | 20272.9 |
| formylglycine-generating enzyme family protein | DU508_03210 | Not Available | Positive | 738039 - 738965 | 34862.7 |
| tonb-dependent receptor | DU508_03215 | Not Available | Positive | 739158 - 742244 | 112005.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_03220 | Not Available | Positive | 742342 - 743820 | 55026.7 |
| arylsulfatase | DU508_03225 | Not Available | Positive | 743929 - 745587 | 61671.1 |
| arylsulfatase | DU508_03230 | Not Available | Positive | 745611 - 747260 | 62033.3 |
| hypothetical protein | DU508_03235 | Not Available | Negative | 747837 - 748184 | 13474.6 |
| hypothetical protein | DU508_03240 | Not Available | Negative | 748187 - 748381 | 7140.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

