Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_02940 | Not Available | Positive | 690872 - 691072 | 7503.04 |
| hypothetical protein | DU508_02945 | Not Available | Positive | 691261 - 691452 | 7364.23 |
| heme-binding protein | DU508_02950 | Not Available | Positive | 691619 - 692023 | 13832.5 |
| llm class flavin-dependent oxidoreductase | DU508_02955 | Not Available | Negative | 692195 - 693199 | 36782.0 |
| response regulator | DU508_02960 | Not Available | Negative | 693296 - 693736 | 17174.3 |
| ai-2e family transporter | DU508_02965 | Not Available | Negative | 693666 - 694730 | 39143.6 |
| duf3175 domain-containing protein | DU508_02970 | Not Available | Positive | 694863 - 695180 | 11953.2 |
| hypothetical protein | DU508_02975 | Not Available | Positive | 695181 - 695399 | 7680.12 |
| sdr family nad(p)-dependent oxidoreductase | DU508_02980 | Not Available | Positive | 695489 - 696496 | 35436.3 |
| rna polymerase sigma factor | DU508_02985 | Not Available | Positive | 696654 - 697178 | 20466.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

