Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acylglucosamine 2-epimerase | DU508_02890 | Not Available | Negative | 675591 - 676769 | 45658.3 |
| sialate o-acetylesterase | DU508_02895 | Not Available | Negative | 676775 - 678859 | 78234.6 |
| glycosyl hydrolase | DU508_02900 | Not Available | Negative | 678846 - 680369 | 56294.6 |
| mfs transporter | DU508_02905 | Not Available | Negative | 680629 - 681861 | 45543.7 |
| hypothetical protein | DU508_02910 | Not Available | Negative | 681858 - 683015 | 42343.5 |
| dihydrodipicolinate synthetase | DU508_02915 | Not Available | Negative | 683075 - 684019 | 34877.2 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_02920 | Not Available | Negative | 684113 - 685684 | 58113.2 |
| tonb-dependent receptor | DU508_02925 | Not Available | Negative | 685695 - 688985 | 120456.0 |
| fadr family transcriptional regulator | DU508_02930 | Not Available | Positive | 689209 - 689907 | 26637.4 |
| hypothetical protein | DU508_02935 | Not Available | Negative | 689919 - 690491 | 21895.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

