Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3606 domain-containing protein | DU508_02790 | Not Available | Negative | 656495 - 656671 | 6471.56 |
| duf3606 domain-containing protein | DU508_02795 | Not Available | Positive | 657104 - 657325 | 8380.92 |
| glycogen debranching enzyme glgx | DU508_02800 | Not Available | Negative | 657665 - 659791 | 81426.1 |
| class a beta-lactamase-related serine hydrolase | DU508_02805 | Not Available | Negative | 660074 - 661183 | 41445.8 |
| voc family protein | DU508_02810 | Not Available | Negative | 661277 - 661666 | 14509.1 |
| hypothetical protein | DU508_02815 | Not Available | Positive | 662062 - 663033 | 35733.6 |
| duf4071 domain-containing protein | DU508_02820 | Not Available | Negative | 663064 - 664788 | 64870.0 |
| hypothetical protein | DU508_02825 | Not Available | Negative | 664800 - 665747 | 35810.8 |
| duf805 domain-containing protein | DU508_02830 | Not Available | Negative | 666022 - 666390 | 14392.3 |
| competence protein | DU508_02835 | Not Available | Negative | 666490 - 667230 | 29256.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

