Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_02740 | Not Available | Negative | 646469 - 646864 | 15275.5 |
| nuclear transport factor 2 family protein | DU508_02745 | Not Available | Positive | 647042 - 647395 | 13633.4 |
| hypothetical protein | DU508_02750 | Not Available | Negative | 647396 - 647590 | 7304.8 |
| gaf domain-containing protein | DU508_02755 | Not Available | Negative | 647587 - 648774 | 43411.2 |
| glycoside hydrolase family 125 protein | DU508_02760 | Not Available | Negative | 649055 - 650479 | 53527.0 |
| glycoside hydrolase | DU508_02765 | Not Available | Negative | 650493 - 651578 | 42433.3 |
| duf1624 domain-containing protein | DU508_02770 | Not Available | Positive | 651853 - 653040 | 45052.4 |
| hypothetical protein | DU508_02775 | Not Available | Negative | 653127 - 653339 | 8510.26 |
| dabb family protein | DU508_02780 | Not Available | Negative | 653437 - 653733 | 11461.7 |
| dna ligase d | DU508_02785 | Not Available | Negative | 653784 - 656483 | 102156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

